BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H11SP1|AL425785
(754 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 1408 0.0
>3x_Contig1762
Length = 22098
Score = 1408 bits (703), Expect = 0.0
Identities = 738/753 (98%), Gaps = 3/753 (0%)
Strand = Plus / Minus
Query: 2 attcgatgcgctttccccattctgttyggttagttcattttcacatttttcatcatttca 61
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 13375 attcgatgcgctttccccattctgttcggttagttcattttcacatttttca-catttca 13317
Query: 62 cttaaaggccttcgaggatttctttatataaawaaagctttagaataagaggttttcctg 121
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 13316 cttaaaggccttcgaggatttctttatataaaaaaagctttagaataagaggttttcctg 13257
Query: 122 tatagagaatgtatttaagatyggyacatggattttytagagagataatttggagcagcg 181
||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||
Sbjct: 13256 tatagagaatgtatttaagatcggcacatggattttctagagagataatttggagcagcg 13197
Query: 182 cgccawaattgtycttagcgtggctactagaagatagaaaagagtttgcagtgtattagt 241
||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 13196 cgccaaaattgtccttagcgtgg-tactagaagatagaaaagagtttgcagtgtattagt 13138
Query: 242 agttggttttcctaatggctgttggttagtgttttgtgttttgtgttgtgttttttggtg 301
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13137 agttggttttcctaa-ggctgttggttagtgttttgtgttttgtgttgtgttttttggtg 13079
Query: 302 attacaaggtaaaaggtaattatttgactgttttctttttgaatttttgtgtcggtggtt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13078 attacaaggtaaaaggtaattatttgactgttttctttttgaatttttgtgtcggtggtt 13019
Query: 362 agatactcgcaatgattggratatctaggaacgtatcgttgacaatgtcgcggattccgt 421
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 13018 agatactcgcaatgattggaatatctaggaacgtatcgttgacaatgtcgcggattccgt 12959
Query: 422 ggccacaggttccacaacgtgtgtkaggtccttatttgaaaaataagacgaagatgttgc 481
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 12958 ggccacaggttccacaacgtgtgtcaggtccttatttgaaaaataagacgaagatgttgc 12899
Query: 482 ttagccagaggtttatgtyatcgggtcccattgtgagaccggagaattcgaaaaaacgca 541
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 12898 ttagccagaggtttatgtcatcgggtcccattgtgagaccggagaattcgaaaaaacgca 12839
Query: 542 tggtgaagtgggttgtcgcgactagttttacgttaatcattagttcgtacttkataaatc 601
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 12838 tggtgaagtgggttgtcgcgactagttttacgttaatcattagttcgtacttgataaatc 12779
Query: 602 agcattaccaaaggataaaagtagcggaatctggcgatgtggtggaaggagattcgcagg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12778 agcattaccaaaggataaaagtagcggaatctggcgatgtggtggaaggagattcgcagg 12719
Query: 662 ataaagtgaaggggaagtatcgtattaaaatattcaataataactggctgtttttctgtt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12718 ataaagtgaaggggaagtatcgtattaaaatattcaataataactggctgtttttctgtt 12659
Query: 722 acagtacgttgccattaawcgccatttcgcgtc 754
|||||||||||||||||| ||||||||||||||
Sbjct: 12658 acagtacgttgccattaaacgccatttcgcgtc 12626
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5055
Number of Sequences: 1807
Number of extensions: 5055
Number of successful extensions: 148
Number of sequences better than 1.0e-20: 1
length of query: 754
length of database: 10,358,551
effective HSP length: 16
effective length of query: 738
effective length of database: 10,329,639
effective search space: 7623273582
effective search space used: 7623273582
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)